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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004173.1_134842_134886_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

134842 - 134886

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGTCAGGT

5'SS Class:

major

3'SS Sequence:

AGGGATGGTGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CATTCAA

U12 Branch Point Sequence:

AGGCATTCAAGG

Flanking Amino Acid:

AYAETIAELEVSPGLCVPPR

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.8

0.35

1.2

58.6

40.6

Major BPS

70.6

0.51

73.3

31.3

Major PPT

51.7

0.04

1.2

42.9

46.7

Minor 5ss

38.3

-1.3

3.4

56.2

Minor BPS

39.4

-0.9

1.8

37.26

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029809

Chromosome:

PEDO01004173.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001734

133034 - 136781

3748