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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004173.1_134967_136528_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

134967 - 136528

Intron Length:

1562

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTGATGAGG

5'SS Class:

weak_major

3'SS Sequence:

CGGTGCCACTGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

CTTTCTTCATTT

Flanking Amino Acid:

GHLRGLANSTVYKLHKCCII

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.3

0.06

1.1

46.2

43.4

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

-0.2

1.7

40.7

Minor 5ss

28.3

-2.5

3.1

31.5

42.5

Minor BPS

55.8

0.26

1.8

75.55

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029809

Chromosome:

PEDO01004173.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001734

133034 - 136781

3748