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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004173.1_162408_165200_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

162408 - 165200

Intron Length:

2793

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCTCTTCTT

5'SS Class:

weak_major

3'SS Sequence:

GTTACCCGCTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCATAAT

U12 Branch Point Sequence:

ATTGGGTTACCC

Flanking Amino Acid:

NMCAASVALSGASPAPVERV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.8

0.04

1.4

46.1

Major BPS

75.2

0.63

1.1

74.5

36.6

Major PPT

47.5

-0.1

1.7

54.5

41.2

Minor 5ss

25.3

-2.8

39.3

40.2

Minor BPS

42.5

-0.5

2.6

59.86

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024053

Chromosome:

PEDO01004173.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038031

162233 - 165976

3744