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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004173.1_2005_2099_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2005 - 2099

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

CCCCCTTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAG

U12 Branch Point Sequence:

CTTGCTGCCACC

Flanking Amino Acid:

SYGKDVLERRERPKVRVSGM

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

48.8

-0

1.5

57.1

41.8

Major PPT

72.4

0.5

0.8

31.1

Minor 5ss

28.9

-2.4

3.3

37.6

47.1

Minor BPS

39.3

-0.8

2.4

53.34

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030106

Chromosome:

PEDO01004173.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036638

21 - 3275

3255