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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004173.1_29197_119190_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29197 - 119190

Intron Length:

89994

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

TGATCATTCATT

Flanking Amino Acid:

RKQAAQSRELVRKDARMVEQ

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

71.4

40.3

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

91.4

0.93

0.6

84.4

30.5

Minor 5ss

-2.2

2.9

34.5

Minor BPS

53.8

0.2

74.98

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027052

Chromosome:

PEDO01004173.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004418

14313 - 137729

123417