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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004173.1_29197_29727_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29197 - 29727

Intron Length:

531

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TCATACATGACT

Flanking Amino Acid:

RKQAAQSRELEKQAAELAWR

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

71.4

40.3

Major BPS

87.6

0.93

0.9

89.3

Major PPT

90.3

0.91

0.6

88.3

21.3

Minor 5ss

-2.2

2.9

34.5

Minor BPS

54.5

0.22

1.9

74.24

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027052

Chromosome:

PEDO01004173.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031181

14313 - 150685

136373

ENSAPLT00000028456

14313 - 137729

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