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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004173.1_29749_119819_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29749 - 119819

Intron Length:

90071

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATCAT

U12 Branch Point Sequence:

CTTACTTTCACT

Flanking Amino Acid:

RELEKQAAELEKQAAELAWR

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

0.57

1.2

41.2

Major PPT

90.3

0.91

0.6

88.3

21.3

Minor 5ss

38.3

-1.3

45.5

42.6

Minor BPS

62.8

0.48

1.8

80.13

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027052

Chromosome:

PEDO01004173.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031181

14313 - 150685

136373