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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004173.1_29749_136890_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29749 - 136890

Intron Length:

107142

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

TGGGCTGTGACC

Flanking Amino Acid:

RELEKQAAELAWRKFLLPHN

Intron Amino Acid Position:

293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

0.22

1.2

52.4

43.3

Major PPT

81.7

0.71

0.7

72.7

32.1

Minor 5ss

38.3

-1.3

45.5

42.6

Minor BPS

46.5

-0.2

2.1

57.52

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027052

Chromosome:

PEDO01004173.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028456

14313 - 137729

123417