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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004173.1_38124_38456_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38124 - 38456

Intron Length:

333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

AACTCCTCACAT

Flanking Amino Acid:

ELAAKKDAKLVEKSAEIDEK

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

72.4

0.56

73.5

32.5

Major PPT

92.2

0.95

0.6

84.9

29.9

Minor 5ss

38.3

-1.3

45.5

42.6

Minor BPS

48.3

-0

1.9

65.35

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027052

Chromosome:

PEDO01004173.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035100

34890 - 109952

75063

ENSAPLT00000029582

14313 - 109952

95640

ENSAPLT00000017729

14313 - 138143

123831