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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004173.1_39031_108881_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39031 - 108881

Intron Length:

69851

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCCCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

CTGCCCCTGATG

Flanking Amino Acid:

WRKFLLPHNTVKVTLDPDTA

Intron Amino Acid Position:

333

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

80.2

0.68

0.8

73.8

31.3

Minor 5ss

34.9

-1.7

3.5

48.2

47.9

Minor BPS

-0.3

1.8

52.5

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027052

Chromosome:

PEDO01004173.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035100

34890 - 109952

75063

ENSAPLT00000029582

14313 - 109952

95640