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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004173.1_45933_46420_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45933 - 46420

Intron Length:

488

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CCCTCAGCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAA

U12 Branch Point Sequence:

CTTCCCTCAGCC

Flanking Amino Acid:

DEAIVDLEVSGADPHISLGG

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

1.1

71.7

38.6

Major BPS

50.5

0.01

1.3

60.6

37.4

Major PPT

64.1

0.32

0.9

56.5

32.5

Minor 5ss

29.4

-2.4

2.9

40.7

Minor BPS

54.9

0.13

1.9

68.44

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030820

Chromosome:

PEDO01004173.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047987

45226 - 48831

3606