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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004173.1_5423_5529_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5423 - 5529

Intron Length:

107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

CTGCCCCACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

GTGTCCCCATCC

Flanking Amino Acid:

YQNNAGSSVQALAYAYGDLL

Intron Amino Acid Position:

328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

64.3

0.32

0.9

57.5

32.3

Minor 5ss

34.4

-1.8

3.4

46.7

48.6

Minor BPS

46.1

-0.3

2.1

60.47

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015298

Chromosome:

PEDO01004173.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015988

4210 - 7132

2923