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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004173.1_62965_79081_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

62965 - 79081

Intron Length:

16117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTCAGGTTA

5'SS Class:

weak_major

3'SS Sequence:

CCAGCTGGAGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCCTAC

U12 Branch Point Sequence:

CCTACCTGAGCC

Flanking Amino Acid:

AYAEAIVELEVCRVRREVRK

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.4

0.13

1.4

59.6

41.9

Major BPS

50.1

1.2

50.2

36.4

Major PPT

46.2

-0.2

1.1

37.1

Minor 5ss

37.7

-1.4

3.3

48.1

47.4

Minor BPS

49.6

-0

1.8

60.01

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028653

Chromosome:

PEDO01004173.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048296

61994 - 101171

39178