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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004173.1_76280_78306_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

76280 - 78306

Intron Length:

2027

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

AGAGATAGGTGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTCCAG

U12 Branch Point Sequence:

TTTCCAGGGAAA

Flanking Amino Acid:

AEAIVELEVSVSIPELEEFE

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

1.1

80.8

31.8

Major BPS

53.4

0.08

1.7

72.5

43.5

Major PPT

39.1

-0.6

1.7

32.9

44.9

Minor 5ss

33.6

-1.9

3.1

44.2

43.6

Minor BPS

40.4

-0.7

2.3

59.39

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018783

Chromosome:

PEDO01004173.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014579

76245 - 83506

7262