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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004173.1_79125_100547_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

79125 - 100547

Intron Length:

21423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGGCTG

5'SS Class:

major

3'SS Sequence:

CCCTGCAGTGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

TGTCCCTGCAGT

Flanking Amino Acid:

REVRKPLAWPVTLDPRTAHP

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

60.8

45.3

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

52.9

0.07

1.1

52.2

35.8

Minor 5ss

29.4

-2.4

3.4

39.3

Minor BPS

47.6

-0.1

2.2

71.32

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028653

Chromosome:

PEDO01004173.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048296

61994 - 101171

39178