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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004181.1_10913_13318_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10913 - 13318

Intron Length:

2406

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCCAGAGGG

5'SS Class:

major

3'SS Sequence:

GACAAGGTCCAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATGACAA

U12 Branch Point Sequence:

GTGGCTCCAATG

Flanking Amino Acid:

APGHQCLGSLTFQAYLPSCH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.2

58.6

42.7

Major BPS

49.8

-0

1.1

58.8

38.1

Major PPT

45.9

-0.2

1.1

32.9

Minor 5ss

15.1

-4

3.5

30.1

Minor BPS

42.3

-0.7

1.9

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028861

Chromosome:

PEDO01004181.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047346

10808 - 13366

2559