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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004182.1_22977_31618_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22977 - 31618

Intron Length:

8642

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTCCTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTCTTTTCTT

Flanking Amino Acid:

TVSNAPVTEYITLPA*

Intron Amino Acid Position:

320

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

83.4

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

82.4

0.73

0.8

73.9

36.8

Minor 5ss

37.3

-1.4

2.9

50.4

39.3

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002516

Chromosome:

PEDO01004182.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041043

22869 - 48071

25203