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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004182.1_30717_31618_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30717 - 31618

Intron Length:

902

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTATC

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTACCAT

U12 Branch Point Sequence:

CCCCCATTACCA

Flanking Amino Acid:

TVSNAPVTEYMSQNANFQNP

Intron Amino Acid Position:

402

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

83.4

Major BPS

65.6

0.39

1.3

75.1

39.4

Major PPT

79.1

0.65

0.7

72.6

32.1

Minor 5ss

37.3

-1.4

2.9

50.4

39.3

Minor BPS

46.5

-0.2

1.9

53.35

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002516

Chromosome:

PEDO01004182.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022875

21143 - 48071

26929

ENSAPLT00000019675

28077 - 49362

21286

ENSAPLT00000040994

22905 - 49362

26458

ENSAPLT00000002562

28352 - 49362

21011

ENSAPLT00000029151

27048 - 49362

22315

ENSAPLT00000028941

22905 - 49362

26458