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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004182.1_31796_33828_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31796 - 33828

Intron Length:

2033

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATAGAGA

5'SS Class:

major

3'SS Sequence:

TTCCTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGTAG

U12 Branch Point Sequence:

CTAGGAGGAACT

Flanking Amino Acid:

CSVPHTWQQKRSSDDDGEEE

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

64.7

40.9

Major BPS

45.6

-0.2

1.7

49.2

Major PPT

88.7

0.87

0.6

84.2

23.8

Minor 5ss

37.1

-1.5

3.2

48.6

47.2

Minor BPS

35.9

-0.9

2.4

54.42

46.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002516

Chromosome:

PEDO01004182.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022875

21143 - 48071

26929

ENSAPLT00000041043

22869 - 48071

25203

ENSAPLT00000019675

28077 - 49362

21286

ENSAPLT00000040994

22905 - 49362

26458

ENSAPLT00000002562

28352 - 49362

21011

ENSAPLT00000029151

27048 - 49362

22315

ENSAPLT00000028941

22905 - 49362

26458