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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004182.1_34808_34907_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34808 - 34907

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTGCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

CTTTCAATAATT

Flanking Amino Acid:

SASREHPTSKEYLMRIQEVL

Intron Amino Acid Position:

267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

1.1

78.8

35.5

Major BPS

76.9

0.67

1.2

31.9

Major PPT

82.8

0.74

0.9

76.5

37.7

Minor 5ss

40.9

-1

3.2

59.5

Minor BPS

60.9

0.42

1.9

82.17

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002516

Chromosome:

PEDO01004182.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028941

22905 - 49362

26458

ENSAPLT00000022875

21143 - 48071

26929

ENSAPLT00000041043

22869 - 48071

25203

ENSAPLT00000019675

28077 - 49362

21286

ENSAPLT00000040994

22905 - 49362

26458

ENSAPLT00000002562

28352 - 49362

21011

ENSAPLT00000029151

27048 - 49362

22315