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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004182.1_35034_43944_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

35034 - 43944

Intron Length:

8911

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGT|GCCGGTAAG

5'SS Class:

weak_major

3'SS Sequence:

CTTGGTCCATGAG|T

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TCTTAAC

U12 Branch Point Sequence:

TAACTCTTAACT

Flanking Amino Acid:

KVVEDNAVLSLLKHCMFCVE

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.3

0.03

1.4

53.1

43.7

Major BPS

77.1

0.67

77.9

32.2

Major PPT

-0

1.7

59.4

41.7

Minor 5ss

20.8

-3.4

3.6

36.7

Minor BPS

75.8

0.89

1.2

83.69

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002516

Chromosome:

PEDO01004182.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019675

28077 - 49362

21286

ENSAPLT00000040994

22905 - 49362

26458

ENSAPLT00000028941

22905 - 49362

26458