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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004182.1_432_7102_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

432 - 7102

Intron Length:

6671

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGTCG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTCAA

U12 Branch Point Sequence:

TCAGCCTCAAGG

Flanking Amino Acid:

DTWISRNRDMTFIFTDGEDE

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

65.8

40.6

Major BPS

55.4

0.13

1.2

59.5

Major PPT

90.3

0.91

0.6

88.5

21.1

Minor 5ss

37.2

-1.4

3.2

44.8

44.2

Minor BPS

47.3

-0.3

52.09

48.1

Associated Gene:

Gene:

LFNG

Ensembl Gene ID:

ENSAPLG00000002412

Chromosome:

PEDO01004182.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036912

21 - 11428

11408

ENSAPLT00000031422

21 - 9969

9949

ENSAPLT00000002433

21 - 9823

9803