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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004182.1_44450_47040_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44450 - 47040

Intron Length:

2591

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTCCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTACAT

U12 Branch Point Sequence:

GCTTCTACATCT

Flanking Amino Acid:

LIRNSRAILLGVCLLGVFAL

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

75.3

40.8

Major BPS

70.2

0.5

1.1

77.2

Major PPT

79.3

0.66

0.8

72.8

32.1

Minor 5ss

36.4

-1.5

2.9

43.6

43.3

Minor BPS

45.8

-0.2

65.81

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002516

Chromosome:

PEDO01004182.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019675

28077 - 49362

21286

ENSAPLT00000041043

22869 - 48071

25203

ENSAPLT00000002562

28352 - 49362

21011

ENSAPLT00000029151

27048 - 49362

22315

ENSAPLT00000028941

22905 - 49362

26458

ENSAPLT00000022875

21143 - 48071

26929