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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004182.1_7948_8072_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7948 - 8072

Intron Length:

125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCGCT

5'SS Class:

major

3'SS Sequence:

GCCGCCGCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCGTGAC

U12 Branch Point Sequence:

CCTAGCGTGACG

Flanking Amino Acid:

EYDKFIESGRKWFCHVDDDN

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

72.5

37.3

Major BPS

46.4

-0.2

1.4

36.7

42.3

Major PPT

57.8

0.18

0.9

49.5

34.1

Minor 5ss

40.7

-1

3.4

57.2

41.4

Minor BPS

41.3

-0.8

2.4

46.55

46.7

Associated Gene:

Gene:

LFNG

Ensembl Gene ID:

ENSAPLG00000002412

Chromosome:

PEDO01004182.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031422

21 - 9969

9949

ENSAPLT00000002433

21 - 9823

9803

ENSAPLT00000036912

21 - 11428

11408