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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004223.1_195_821_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

195 - 821

Intron Length:

627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTAAA

U12 Branch Point Sequence:

AAAGCAGTAACA

Flanking Amino Acid:

CEHCAEDLRERLRTNQPDTS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

1.2

75.8

Major BPS

59.8

0.24

1.2

61.9

33.9

Major PPT

84.8

0.78

0.7

79.7

25.8

Minor 5ss

36.9

-1.5

2.7

45.6

42.5

Minor BPS

45.2

-0.3

2.2

57.23

41.6

Associated Gene:

Gene:

GFER

Ensembl Gene ID:

ENSAPLG00000026677

Chromosome:

PEDO01004223.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025958

21 - 1143

1123