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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004232.1_18439_19003_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

18439 - 19003

Intron Length:

565

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAA|GCAGGACTT

5'SS Class:

major

3'SS Sequence:

GAGGTAGGTGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTCTGAA

U12 Branch Point Sequence:

GTAGTCTGAAGC

Flanking Amino Acid:

KEDTRTILKVSRKKSRGSPR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.2

71.3

38.4

Major BPS

64.4

0.36

1.2

57.3

41.7

Major PPT

42.2

-0.4

1.7

35.6

44.6

Minor 5ss

27.9

-2.5

4.4

47.6

42.4

Minor BPS

47.4

-0.2

1.8

56.34

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027613

Chromosome:

PEDO01004232.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041135

16307 - 19107

2801