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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004257.1_228_567_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

228 - 567

Intron Length:

340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGGA

5'SS Class:

major

3'SS Sequence:

CGGGGCACGGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTGGAC

U12 Branch Point Sequence:

TGCTCCTGGACC

Flanking Amino Acid:

LPDALGHHQPEVLQLGVLGG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

64.2

42.1

Major BPS

44.7

-0.3

1.3

40.4

Major PPT

-0

1.1

39.9

39.2

Minor 5ss

27.5

-2.6

3.6

38.1

46.8

Minor BPS

65.5

0.47

1.5

71.59

39.7

Associated Gene:

Gene:

MTSS2

Ensembl Gene ID:

ENSAPLG00000020636

Chromosome:

PEDO01004257.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031739

21 - 3884

3864