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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004257.1_643_769_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

643 - 769

Intron Length:

127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TCGGTGCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCCAC

U12 Branch Point Sequence:

CCGTGCCCACCC

Flanking Amino Acid:

VGQRVQLPHLGLVQGQPLRP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

71.8

39.7

Major BPS

48.9

-0

1.3

58.1

40.4

Major PPT

72.6

0.51

65.2

41.1

Minor 5ss

31.9

-2.1

2.9

43.6

43.3

Minor BPS

36.4

-1

2.2

42.41

44.7

Associated Gene:

Gene:

MTSS2

Ensembl Gene ID:

ENSAPLG00000020636

Chromosome:

PEDO01004257.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031739

21 - 3884

3864