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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004301.1_3995_4230_R

Intron Information:

Intron Rank:

137105

Intron Class:

major

Intron Phase:

Intron Coordinates:

3995 - 4230

Intron Length:

236

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACCGGG

5'SS Class:

major

3'SS Sequence:

CTCTGCGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAG

U12 Branch Point Sequence:

GTGTCCGGGATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.2

47.1

Major BPS

53.2

0.08

1.7

65.3

43.7

Major PPT

75.2

0.57

0.9

68.4

37.4

Minor 5ss

41.3

-1

3.3

55.9

48.3

Minor BPS

44.5

-0.5

2.2

51.54

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021260

Chromosome:

PEDO01004301.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048440

3081 - 4958

1878