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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004336.1_539_662_F

Intron Information:

Intron Rank:

139948

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

539 - 662

Intron Length:

124

Sequence Information:

Terminal Dinucleotides:

GT-AT

5'SS Sequence:

TGT|GTGGGGCAC

5'SS Class:

weak_major

3'SS Sequence:

ATGGGGTCGAGAT|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACAAGAT

U12 Branch Point Sequence:

ATAGGAACAAGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.5

0.06

1.2

43.9

39.7

Major BPS

48.4

-0.1

1.1

37.8

Major PPT

25.2

-1.4

3.2

30.9

41.4

Minor 5ss

26.2

-2.7

3.4

32.5

42.6

Minor BPS

31.7

-1.3

2.2

41.05

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025238

Chromosome:

PEDO01004336.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040620

21 - 677

657

ENSAPLT00000018533

21 - 719

699