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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004337.1_2268_2358_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2268 - 2358

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGGCCA

5'SS Class:

major

3'SS Sequence:

CCCCCTCTCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGCGAC

U12 Branch Point Sequence:

GTTTCTTTTTCC

Flanking Amino Acid:

VAVSKTRAKATMNDFDYLKL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

59.6

40.8

Major BPS

39.7

-0.6

1.2

27.1

32.7

Major PPT

74.5

0.55

0.7

71.6

26.4

Minor 5ss

26.1

-2.7

3.1

31.7

42.2

Minor BPS

44.5

-0.4

3.6

71.15

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030942

Chromosome:

PEDO01004337.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026758

791 - 2849

2059