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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004360.1_1309_1657_R

Intron Information:

Intron Rank:

154112

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1309 - 1657

Intron Length:

349

Sequence Information:

Terminal Dinucleotides:

GT-AT

5'SS Sequence:

AAT|GTGACCCTA

5'SS Class:

weak_major

3'SS Sequence:

TGCTGCCCTAAAT|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGGGAT

U12 Branch Point Sequence:

GCTGCCCTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.6

0.23

1.2

57.9

42.8

Major BPS

46.5

-0.2

1.6

42.8

49.4

Major PPT

-0.7

3.1

52.3

37.3

Minor 5ss

-0.7

3.1

60.5

44.4

Minor BPS

52.2

0.15

1.9

70.82

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030410

Chromosome:

PEDO01004360.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048421

45 - 2648

2604