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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004370.1_4234_4767_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4234 - 4767

Intron Length:

534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

TTTCTGTCTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATGAA

U12 Branch Point Sequence:

TATTCCCCAAAT

Flanking Amino Acid:

KDYFKERHNKDLNEILEEAA

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

35.3

Major BPS

58.9

0.22

49.8

35.1

Major PPT

81.9

0.72

0.8

77.5

31.2

Minor 5ss

39.9

-1.1

3.4

54.7

43.6

Minor BPS

56.4

0.28

80.36

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009327

Chromosome:

PEDO01004370.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009704

2627 - 5777

3151