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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004373.1_1803_1992_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1803 - 1992

Intron Length:

190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

GTGTGTCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGCCAA

U12 Branch Point Sequence:

CGATTGCCAACG

Flanking Amino Acid:

VEVESPSITLDLSSCEVSGS

Intron Amino Acid Position:

352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

0.07

1.4

64.5

42.8

Major PPT

68.9

0.43

61.5

40.2

Minor 5ss

29.9

-2.3

3.4

45.6

Minor BPS

37.7

-1

2.3

41.5

42.8

Associated Gene:

Gene:

IRF1

Ensembl Gene ID:

ENSAPLG00000009708

Chromosome:

PEDO01004373.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010113

21 - 5405

5385