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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004381.1_474_569_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

474 - 569

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTGGAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

AATCCTTTAACC

Flanking Amino Acid:

DGTPLAIKVQYPGVARSIGS

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

67.6

39.4

Major BPS

77.3

0.68

79.3

29.4

Major PPT

76.9

0.6

1.7

88.3

28.9

Minor 5ss

32.7

-2

39.6

45.9

Minor BPS

74.4

0.75

1.1

75.79

33.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030209

Chromosome:

PEDO01004381.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031162

369 - 1379

1011