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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004401.1_3029_4309_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3029 - 4309

Intron Length:

1281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

CCTTCCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCGGAG

U12 Branch Point Sequence:

AGCCGCGCGACG

Flanking Amino Acid:

LAVTEKEVQQWYKGFIKDCP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.8

82.3

Major BPS

37.6

-0.7

1.5

28.5

36.6

Major PPT

82.5

0.73

0.7

76.7

25.3

Minor 5ss

33.1

-1.9

2.7

40.7

39.2

Minor BPS

34.4

-1.3

2.3

35.17

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010190

Chromosome:

PEDO01004401.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010624

2916 - 5271

2356