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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004401.1_5050_5188_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5050 - 5188

Intron Length:

139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTAAGTGGC

5'SS Class:

major

3'SS Sequence:

ATCTCTCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCACAT

U12 Branch Point Sequence:

ATCTCCACATCT

Flanking Amino Acid:

SRGTLDEKLRWAFKLYDLDN

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.53

1.1

64.4

41.2

Major BPS

65.1

0.38

1.1

71.2

35.2

Major PPT

78.6

0.64

0.8

73.2

30.9

Minor 5ss

-1.7

3.3

44.4

43.5

Minor BPS

48.3

-0

2.1

71.84

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010190

Chromosome:

PEDO01004401.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010624

2916 - 5271

2356