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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004432.1_2530_2640_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2530 - 2640

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGACA

5'SS Class:

strong_major

3'SS Sequence:

CCCAAACTGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCCCAA

U12 Branch Point Sequence:

CGTGCCCAAACT

Flanking Amino Acid:

KQCPVVEPVRRESQVLNVRG

Intron Amino Acid Position:

295

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

77.5

32.3

Major BPS

49.1

-0

1.3

58.4

40.3

Major PPT

56.7

0.15

50.1

37.9

Minor 5ss

27.1

-2.6

2.9

31.6

42.4

Minor BPS

48.2

-0

2.1

69.09

47.4

Associated Gene:

Gene:

GHDC

Ensembl Gene ID:

ENSAPLG00000020118

Chromosome:

PEDO01004432.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047770

2032 - 4114

2083