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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004441.1_2163_2506_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2163 - 2506

Intron Length:

344

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGGAGG

5'SS Class:

major

3'SS Sequence:

CTGCTCTCCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

TGCACACTGACT

Flanking Amino Acid:

IKLKFLEENKIKVMHKQLLL

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

60.4

45.8

Major BPS

61.3

0.28

52.7

34.2

Major PPT

69.5

0.44

0.8

61.9

34.8

Minor 5ss

24.8

-2.9

3.1

30.1

43.2

Minor BPS

47.1

-0.1

67.24

42.9

Associated Gene:

Gene:

ARFIP2

Ensembl Gene ID:

ENSAPLG00000009223

Chromosome:

PEDO01004441.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041535

572 - 6478

5907

ENSAPLT00000029702

572 - 4596

4025

ENSAPLT00000009608

572 - 6478

5907