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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004446.1_165_438_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

165 - 438

Intron Length:

274

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGGC

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTGAT

U12 Branch Point Sequence:

CTCACTGTGATC

Flanking Amino Acid:

LALALALGPAGVWTQLSLVE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

66.6

39.6

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

86.4

0.82

0.7

84.4

23.4

Minor 5ss

31.2

-2.1

3.3

41.1

45.6

Minor BPS

-0.4

53.1

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019841

Chromosome:

PEDO01004446.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033192

21 - 1604

1584