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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004477.1_64_789_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

64 - 789

Intron Length:

726

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGTGCTCT

5'SS Class:

weak_major

3'SS Sequence:

TACCCAGATGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCTCAT

U12 Branch Point Sequence:

GGAACCTCATCT

Flanking Amino Acid:

VLKKLNNPLVLCSILLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.1

0.38

1.1

63.1

37.6

Major BPS

73.5

0.58

73.6

32.5

Major PPT

46.1

-0.2

1.7

47.1

39.4

Minor 5ss

49.6

-0

2.7

69.5

41.3

Minor BPS

48.2

-0

1.9

64.28

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023044

Chromosome:

PEDO01004477.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042797

43 - 1322

1280