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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004480.1_1880_2179_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1880 - 2179

Intron Length:

300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

TGCTCTCTGACT

Flanking Amino Acid:

SAVRILEVVKDKAGPHKEIY

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

69.1

0.47

60.7

37.6

Major PPT

81.9

0.72

0.7

77.1

24.9

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

59.9

0.39

1.7

76.58

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020394

Chromosome:

PEDO01004480.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039229

320 - 4117

3798

ENSAPLT00000020131

1132 - 4117

2986