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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004480.1_2302_3178_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2302 - 3178

Intron Length:

877

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CCTGCGCTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAA

U12 Branch Point Sequence:

GGCTGCTCAATG

Flanking Amino Acid:

PDIDAWELRKGINTLVGYDL

Intron Amino Acid Position:

137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

74.1

36.6

Major BPS

70.6

0.51

1.1

71.6

36.4

Major PPT

68.1

0.41

0.9

35.5

Minor 5ss

38.1

-1.3

3.1

49.4

46.8

Minor BPS

46.3

-0.4

48.97

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020394

Chromosome:

PEDO01004480.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041023

679 - 4117

3439

ENSAPLT00000039229

320 - 4117

3798

ENSAPLT00000020131

1132 - 4117

2986