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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004480.1_463_1756_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

463 - 1756

Intron Length:

1294

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

TTTGTGACGACT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

69.6

41.1

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

89.4

0.89

0.8

84.7

30.1

Minor 5ss

31.1

-2.2

3.6

43.6

Minor BPS

41.2

-0.6

2.4

67.65

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020394

Chromosome:

PEDO01004480.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039229

320 - 4117

3798