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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004514.1_27369_27838_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27369 - 27838

Intron Length:

470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

GTTGTACCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAG

U12 Branch Point Sequence:

TTCTTGGGAGCT

Flanking Amino Acid:

GGAAAMDGRLGVNDCVLRVN

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

77.5

32.8

Major BPS

48.8

-0

1.5

57.1

41.8

Major PPT

70.3

0.46

0.9

63.1

38.6

Minor 5ss

30.4

-2.2

3.2

31.7

42.6

Minor BPS

38.6

-0.7

2.6

63.74

46.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030194

Chromosome:

PEDO01004514.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025765

22541 - 28812

6272