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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004514.1_28335_28479_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28335 - 28479

Intron Length:

145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGCCCC

5'SS Class:

major

3'SS Sequence:

CCCCCCCCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

ACCATCTCACCA

Flanking Amino Acid:

RLQIGDRLLAVNNTNLQDVR

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

1.1

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

62.4

0.28

0.9

57.2

27.1

Minor 5ss

39.6

-1.2

53.3

43.4

Minor BPS

44.6

-0.4

1.8

49.83

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030194

Chromosome:

PEDO01004514.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025765

22541 - 28812

6272