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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004523.1_951_1531_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

951 - 1531

Intron Length:

581

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

CGTTGCCTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTGAC

U12 Branch Point Sequence:

AGGGGGGTGACC

Flanking Amino Acid:

VAVHCVAGLGRAPVLVALAL

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

69.2

43.2

Major BPS

45.4

-0.2

1.4

34.5

43.7

Major PPT

77.9

0.63

0.9

73.4

37.1

Minor 5ss

-1.8

2.9

42.1

44.4

Minor BPS

32.5

-1.4

2.6

39.65

40.3

Associated Gene:

Gene:

PTP4A3

Ensembl Gene ID:

ENSAPLG00000029933

Chromosome:

PEDO01004523.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039411

250 - 1878

1629