Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004635.1_676_757_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

676 - 757

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGGCT

5'SS Class:

strong_major

3'SS Sequence:

GTTCCCCACGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAC

U12 Branch Point Sequence:

GGTTCCCCACGC

Flanking Amino Acid:

EEVTTITPTQGFNIKSVHSH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

73.2

34.8

Major BPS

49.9

-0

1.3

60.3

37.5

Major PPT

68.7

0.42

0.9

62.5

33.5

Minor 5ss

30.5

-2.2

3.8

47.1

48.5

Minor BPS

40.8

-0.7

2.2

53.1

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027828

Chromosome:

PEDO01004635.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017399

21 - 1084

1064