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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004643.1_917_1098_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

917 - 1098

Intron Length:

182

Sequence Information:

Terminal Dinucleotides:

GT-TG

5'SS Sequence:

ATG|GTGCCACCA

5'SS Class:

weak_major

3'SS Sequence:

CACCATGCCCGTG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAATGAC

U12 Branch Point Sequence:

CGTGCCATAATG

Flanking Amino Acid:

CPCPWCHRAMVPPCRDATAS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.1

1.2

45.1

38.5

Major BPS

0.42

1.1

57.7

Major PPT

27.8

-1.2

3.2

34.2

35.3

Minor 5ss

31.4

-2.1

3.2

37.1

Minor BPS

50.8

-0.1

1.8

56.75

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021493

Chromosome:

PEDO01004643.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021717

21 - 1355

1335