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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01004690.1_1893_2704_F

Intron Information:

Intron Rank:

125471

Intron Class:

major

Intron Phase:

Intron Coordinates:

1893 - 2704

Intron Length:

812

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACGCCAT

5'SS Class:

major

3'SS Sequence:

TCTCGTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTGCAG

U12 Branch Point Sequence:

TTCTCTAGGAGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

61.7

44.4

Major BPS

45.5

-0.2

1.7

60.7

45.9

Major PPT

85.3

0.79

0.8

79.9

32.1

Minor 5ss

38.6

-1.3

3.4

52.7

46.4

Minor BPS

44.7

-0.4

59.61

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017619

Chromosome:

PEDO01004690.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041826

554 - 3198

2645